Information for 12-TAKCTCATAGCCA (Motif 13)

G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A
Reverse Opposite:
C A G T A C T G A C T G T A G C A G C T C G T A A C G T C T A G C G T A C T A G G T C A G A C T C T G A
p-value:1e-10
log p-value:-2.335e+01
Information Content per bp:1.708
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 9.1bp
Average Position of motif in Background31.6 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TAKCTCATAGCCA----
--CCGCATAGCAACGGA
 G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAKCTCATAGCCA----
--TACCATAGCAACGGT
 G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAKCTCATAGCCA
-ACATCAAAGG--
 G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAKCTCATAGCCA--------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAKCTCATAGCCA--
TTGGCANNNTGCCAAG
 A C G T G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TAKCTCATAGCCA--
TGTTKCCTAGCAACM
 G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TAKCTCATAGCCA--
AAGTTCAAGGTCAGC
 G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TAKCTCATAGCCA-
TGGCACCATGCCAA
 G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TAKCTCATAGCCA
-ACATCAAAGGNA
 G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TAKCTCATAGCCA
-AGGTCAAGGTCA
 G A C T C T G A A C G T A G T C G A C T A G T C G T C A C G A T C T G A A T C G T A G C G T A C G C T A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A