Information for 14-AGGCAGGCTGGGA (Motif 21)

C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A
Reverse Opposite:
G A C T A G T C G T A C A G T C C T G A A C T G A G T C G T A C A C G T A C T G A G T C G T A C A G C T
p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.839
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif57.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets44.7 +/- 26.8bp
Average Position of motif in Background47.1 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGCAGGCTGGGA---
-RGSMTBCTGGGAAAT
 C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGCAGGCTGGGA--
NNTCCTGCTGTGNNN
 C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGCAGGCTGGGA--
TCNCCTGCTGNGNNN
 C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGGCAGGCTGGGA--
TNTCCTGCTGTGNNG
 C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGGCAGGCTGGGA
---CCTGCTGAGH
 C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGCAGGCTGGGA
AAGGCAAGTGT---
 A C G T C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAGGCTGGGA-
CAATGCATTGTGGGTA
 A C G T A C G T C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGGCAGGCTGGGA-
----WDNCTGGGCA
 C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAGGCTGGGA
SCAGYCADGCATGAC
 A C G T A C G T C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGGCAGGCTGGGA
------GCTGTG-
 C T G A A C T G A C T G G T A C G T C A C A T G A C T G A G T C A G C T A C T G A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T