p-value: | 1e-10 |
log p-value: | -2.486e+01 |
Information Content per bp: | 1.808 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.61% |
Number of Background Sequences with motif | 0.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 56.4 +/- 20.1bp |
Average Position of motif in Background | 82.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGCGTCACTGCCC- NAGGTCANTGACCT |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CGCGTCACTGCCC CGCGCCGGGTCACGTA-- |
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Pax2/MA0067.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGCGTCACTGCCC --AGTCACGC--- |
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Atf1/MA0604.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGCGTCACTGCCC TACGTCAT----- |
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MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGCGTCACTGCCC -ACGTCA------ |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CGCGTCACTGCCC AGAGCGGGGTCAAGTA-- |
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CREB1/MA0018.2/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CGCGTCACTGCCC TGACGTCA------ |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CGCGTCACTGCCC NTNNNGGGGTCANGNNN- |
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Hnf4a/MA0114.3/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGCGTCACTGCCC--- GGGGTCAAAGTCCAAT |
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PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGCGTCACTGCCC---- ---GTCACGCTCNCTGA |
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