Information for 12-CCTCCTATTGGAC (Motif 19)

A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A A T C G T A C G
p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.2 +/- 5.0bp
Average Position of motif in Background55.5 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCTCCTATTGGAC
---CCGATTGGCT
 A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCTATTGGAC-
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTCCTATTGGAC-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCTCCTATTGGAC-------
----NNATTGGACTTTNGNN
 A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCTCCTATTGGAC-----
---CTGATTGGTCNATTT
 A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTCCTATTGGAC
GATAACATCCTAGTAG--
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CCTCCTATTGGAC-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCTCCTATTGGAC
CCACCTGTTGCAT
 A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

PH0089.1_Isx/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCTATTGGAC--
ACNNCTAATTAGNNNN
 A C G T A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTCCTATTGGAC---
TGTTCCCATTGTGTACT
 A C G T A G T C A T G C A C G T A G T C A G T C C G A T C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T