Information for 16-GCGGAGCCAA (Motif 14)

T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A
Reverse Opposite:
A G C T G C A T A C T G A C T G G T A C A G C T A T G C T A G C A T C G A G T C
p-value:1e-9
log p-value:-2.132e+01
Information Content per bp:1.831
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif103.6
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets62.7 +/- 22.1bp
Average Position of motif in Background46.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCCAA
-CGGAGC---
 T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCGGAGCCAA----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCGGAGCCAA-
--CGTGCCAAG
 T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GCGGAGCCAA
----TGCCAA
 T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCGGAGCCAA----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCCAA
RGKGGGCGGAGC---
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCGGAGCCAA
GGGGGCGGGGCC--
 A C G T A C G T A C G T A C G T T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGGAGCCAA--
--GGTGCCAAGT
 T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCGGAGCCAA----
----AGCCAATCGG
 T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGGAGCCAA---
-ACTAGCCAATCA
 T A C G A T G C A T C G A T C G C T G A A C T G A G T C G T A C C G T A C T G A A C G T A C G T A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A