Information for 5-GCCCTTGCACBCTGGG (Motif 10)

C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G
Reverse Opposite:
A G T C A G T C A G T C C G T A A T C G T A C G A C T G A G C T A C T G A G T C G T C A C G T A C T A G A C T G A T C G A G T C
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.812
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.4 +/- 29.4bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCCTTGCACBCTGGG--
--CAATGCATTGTGGGTA
 C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G A C G T A C G T
A C G T A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCCCTTGCACBCTGGG----
-----RGSMTBCTGGGAAAT
 C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTGCACBCTGGG
TGGACTTTGNNCTNTG--
 A C G T A C G T C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTGCACBCTGGG
TGGACTTTGNNCTCN---
 A C G T A C G T C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTTGCACBCTGGG
GCTGACCTTGAACTN----
 A C G T A C G T A C G T C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGCACBCTGGG
TGACCTTGACCT-----
 A C G T C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCCCTTGCACBCTGGG--
-----TGCCCTGAGGGCA
 C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCCCTTGCACBCTGGG-
-------CCTGCTGAGH
 C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCCCTTGCACBCTGGG---
----TCNCCTGCTGNGNNN
 C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCCCTTGCACBCTGGG--
-----TGCCCTNAGGGCA
 C T A G A T G C A G T C A G T C A C G T A C G T A C T G G T A C C T G A A G T C A T G C A T G C A C G T A C T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A