Information for 5-GARCTAGATATMATGT (Motif 9)

C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T
Reverse Opposite:
C T G A A T G C C G T A A C G T A C G T C G T A C G A T C T G A C G A T T A G C G A C T C T G A A C T G A G C T C G A T A G T C
p-value:1e-13
log p-value:-3.118e+01
Information Content per bp:1.728
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.8 +/- 16.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GARCTAGATATMATGT---
NNNNNBAGATAWYATCTVHN
 A C G T C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GARCTAGATATMATGT------
NNNNNCGATANNATCTNNNNAN
 C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GARCTAGATATMATGT
GAAAACTAGTTAACATC-
 A C G T A C G T C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GARCTAGATATMATGT--
--TATAATTATAATATTC
 C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T A C G T A C G T
A C G T A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0105.1_Arid3a_2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GARCTAGATATMATGT--
---ACCCGTATCAAATTT
 C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T A C G T A C G T
A C G T A C G T A C G T G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GARCTAGATATMATGT--
--NCGTATTATAATCNTA
 C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T A C G T A C G T
A C G T A C G T A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GARCTAGATATMATGT
TTGACCTANTTATN----
 A C G T A C G T C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GARCTAGATATMATGT-----
----NNTTTTACATGTANNNT
 C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GARCTAGATATMATGT-
GACAGAGATATCAGTGT
 C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GARCTAGATATMATGT-----
----NNTATTACATGTANNNT
 C T A G C G T A C T G A G T A C G A C T C T G A A T C G C G T A A G C T C G T A C G A T G T C A C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T