Information for 3-TTAGAAACWTGATTAS (Motif 6)

C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C
Reverse Opposite:
A T C G A C G T C T G A C G T A C G A T A G T C C G T A C G T A C T A G A C G T A C G T C A G T A G T C A G C T T G C A C G T A
p-value:1e-14
log p-value:-3.230e+01
Information Content per bp:1.735
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.6 +/- 25.3bp
Average Position of motif in Background48.3 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTAGAAACWTGATTAS
---GWAAYHTGABMC-
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTAGAAACWTGATTAS
----TAATTTAATTA-
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C
A C G T A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TTAGAAACWTGATTAS
----TAATTTAATTA-
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C
A C G T A C G T A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTAGAAACWTGATTAS
---NTAATBNAATTA-
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C
A C G T A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:5
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TTAGAAACWTGATTAS-
-------NTTAATTACN
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTAGAAACWTGATTAS
---GWAAYHTGAKMC-
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C
A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTAGAAACWTGATTAS
---GTAATCDGATTA-
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C
A C G T A C G T A C G T C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T

EVX2/MA0888.1/Jaspar

Match Rank:8
Score:0.61
Offset:7
Orientation:forward strand
Alignment:TTAGAAACWTGATTAS-
-------GGTAATTAGC
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTAGAAACWTGATTAS
----TAATYNRATTAR
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C
A C G T A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TTAGAAACWTGATTAS
------ADBTAATTAR
 C G A T A C G T C T G A C T A G G T C A G T C A C G T A A G T C C G A T A C G T C T A G C G T A A C G T A G C T G T C A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G