Information for 3-TTCGKTATCASTT (Motif 4)

A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T
Reverse Opposite:
C T G A C G T A A T C G C G A T A C T G C G T A A C G T C T G A G T C A A G T C A T C G G T C A C G T A
p-value:1e-16
log p-value:-3.723e+01
Information Content per bp:1.789
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.3 +/- 15.2bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCGKTATCASTT--
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCGKTATCASTT--
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCGKTATCASTT--
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCGKTATCASTT--
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCGKTATCASTT--
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTCGKTATCASTT--
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCGKTATCASTT--
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTCGKTATCASTT
CTTTCANTATGACTV
 A C G T A C G T A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

GATA5/MA0766.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTCGKTATCASTT
--TCTTATCT---
 A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T
A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTCGKTATCASTT--
AATAGGGTATCAATATT
 A C G T A C G T A C G T A C G T A T G C C T A G A C G T A G C T C G T A A C G T A G T C C G T A A T G C A C G T G A C T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T