Information for 17-TGATTAAACACAA (Motif 21)

A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A T C G A C G T A C G T G A C T C G T A C G T A A C G T G T A C C G T A
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 20.8bp
Average Position of motif in Background67.0 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGATTAAACACAA---
AAAGTAAACAAAAATT
 A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGATTAAACACAA
--ATTAAA-----
 A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGATTAAACACAA
CAAAAGTAAACAAAG
 A C G T A C G T A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGATTAAACACAA
NNNVCTGWGYAAACASN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGATTAAACACAA
-AAGTAAACAAA-
 A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGATTAAACACAA
AAAGTAAACA---
 A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGATTAAACACAA
---GTAAACA---
 A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGATTAAACACAA
-NDGTAAACARRN
 A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGATTAAACACAA
AAAGTAAACA---
 A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGATTAAACACAA
-AAATAAACA---
 A C G T A C T G G T C A A C G T A C G T C T G A C G T A C G T A A T G C C G T A A G T C C G T A C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T