Information for 16-MGCCTGCAGG (Motif 24)

T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A T G C C G T A A C T G A T C G T A G C A C T G
p-value:1e-5
log p-value:-1.288e+01
Information Content per bp:1.869
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif155.3
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets55.5 +/- 23.6bp
Average Position of motif in Background47.6 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:MGCCTGCAGG--
TGCCCNGGGGCA
 T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:MGCCTGCAGG--
TGCCCTNGGGCA
 T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---MGCCTGCAGG--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:MGCCTGCAGG--
TGCCCCAGGGCA
 T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-MGCCTGCAGG-
CCCCCTGCTGTG
 A C G T T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:MGCCTGCAGG-----
---SDGCAGGTGCNS
 T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MGCCTGCAGG----
TCNCCTGCTGNGNNN
 A C G T T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:MGCCTGCAGG--
--CCTGCTGAGH
 T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-MGCCTGCAGG---
TTGCCCTAGGGCAT
 A C G T T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-MGCCTGCAGG----
TNTCCTGCTGTGNNG
 A C G T T G A C A T C G A T G C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G