Information for 3-GGAGYCGGTGCTT (Motif 7)

A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
Reverse Opposite:
T G C A C T G A C A T G A G T C G T C A A T G C A T G C A T C G T C A G A T G C A C G T A T G C A G T C
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.730
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.38%
Number of Background Sequences with motif670.4
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets40.7 +/- 25.3bp
Average Position of motif in Background52.5 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGAGYCGGTGCTT
-SDGCAGGTGCNS
 A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAGYCGGTGCTT
GGGGGCGGGGCC-
 A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGAGYCGGTGCTT
TGCGTGGGYG---
 A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGAGYCGGTGCTT
GGGGGCGGGGC--
 A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAGYCGGTGCTT
AGGGGGCGGGGCTG
 A C G T A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGAGYCGGTGCTT
RGKGGGCGGAGC--
 A C G T A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGAGYCGGTGCTT
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGYCGGTGCTT--
NNGCGTGTGTGCNGCN
 A C G T A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAGYCGGTGCTT
-GAGSCCGAGC--
 A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGAGYCGGTGCTT
--NNCAGGTGTN-
 A C T G A T C G T G C A A T C G A G T C T A G C A T C G A T C G C A G T A C T G G T A C A G C T A C G T
A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T