Information for 2-GGCCCCGGAT (Motif 6)

C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T
Reverse Opposite:
T C G A C G A T A G T C G A T C A C T G C A T G T A C G A C T G T G A C G T A C
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.637
Number of Target Sequences with motif130.0
Percentage of Target Sequences with motif13.54%
Number of Background Sequences with motif3611.5
Percentage of Background Sequences with motif7.54%
Average Position of motif in Targets49.9 +/- 26.4bp
Average Position of motif in Background50.2 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGCCCCGGAT---
--ACCCGGATGTA
 C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T A C G T
A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCCGGAT----
AANNATCCGGATGTNN
 A C G T A C G T C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

ETV5/MA0765.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGCCCCGGAT---
---ACCGGAAGTG
 C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGCCCCGGAT---
---RCCGGAARYN
 C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

ETV4/MA0764.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGCCCCGGAT---
---ACCGGAAGTA
 C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C T G A C A T C G A C T G C T G A G C T A T C A G A G C T C T G A

ETV1/MA0761.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGCCCCGGAT---
---ACCGGAAGTA
 C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGCCCCGGAT--
--ANCAGGATGT
 C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T
A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGCCCCGGAT---
---RCCGGAAGTD
 C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGCCCCGGAT---
---DCCGGAARYN
 C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G

FEV/MA0156.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCCCCGGAT---
---ACCGGAAGTG
 C A T G A C T G G T A C A T G C G T A C T G A C C T A G T C A G G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G A C T G A C C T A G C A T G G C T A G C T A T C A G A G C T C T A G