Information for 2-GBTGCTGCTGAGG (Motif 5)

A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T A G T C C G T A A C T G G T A C G T C A A C T G A G T C C G T A T C A G A G T C
p-value:1e-10
log p-value:-2.336e+01
Information Content per bp:1.851
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.3 +/- 21.1bp
Average Position of motif in Background51.7 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GBTGCTGCTGAGG
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GBTGCTGCTGAGG
--ANCAGCTG---
 A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GBTGCTGCTGAGG
CCCCCTGCTGTG-
 A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GBTGCTGCTGAGG
AGCAGCTGCT----
 A C G T A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GBTGCTGCTGAGG
--CGCAGCTGCG-
 A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GBTGCTGCTGAGG
GGCCYCCTGCTGDGH
 A C G T A C G T A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GBTGCTGCTGAGG
AGCAGCTGCTNN--
 A C G T A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GBTGCTGCTGAGG--
-----TGCTGACTCA
 A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GBTGCTGCTGAGG--
GGNGCGNCTGTTNNN
 A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GBTGCTGCTGAGG------
----NTGCTGAGTCATCCN
 A C T G A G T C C G A T A C T G A G T C A C G T A C T G A G T C C G A T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T