Information for 2-GGCTGCTCCGGAGCAG (Motif 3)

C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
Reverse Opposite:
A G T C C A G T A C T G A G T C A C G T A T G C T G A C A T C G A T C G T G C A A C T G A T G C G C T A A C T G A T G C G A T C
p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.742
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif83.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets50.9 +/- 27.9bp
Average Position of motif in Background51.8 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGCTGCTCCGGAGCAG
----GCGCATGCGCAG
 C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
A C G T A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCTGCTCCGGAGCAG
----GCTCCG------
 C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGCTGCTCCGGAGCAG
----GCGCCTGCGCA-
 C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCTGCTCCGGAGCAG
---TGCCCCCGGGCA-
 C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGCTGCTCCGGAGCAG
---TGCCCCAGGGCA-
 C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGCTGCTCCGGAGCAG
---TGCCCCAGGGCA-
 C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
A C G T A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCTGCTCCGGAGCAG
CGCAGCTGCG------
 C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGCTGCTCCGGAGCAG
CNGTCCTCCC------
 C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----GGCTGCTCCGGAGCAG
NNNNAGCAGCTGCTGAN---
 A C G T A C G T A C G T A C G T C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.49
Offset:8
Orientation:forward strand
Alignment:GGCTGCTCCGGAGCAG----
--------CACAGCAGGGGG
 C T A G A T C G A G T C C G A T A T C G A G T C A C G T A T G C A T G C A C T G T A C G T G C A A C T G A G T C G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G