Information for 3-KGCCTAAGCG (Motif 11)

A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G
Reverse Opposite:
T A G C A C T G A G T C A G C T C A G T T G C A C T A G C T A G A T G C T G C A
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.664
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.42%
Number of Background Sequences with motif1025.3
Percentage of Background Sequences with motif2.14%
Average Position of motif in Targets51.7 +/- 24.2bp
Average Position of motif in Background50.3 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:KGCCTAAGCG
-----CAGCC
 A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KGCCTAAGCG
--GCTAATCC
 A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-KGCCTAAGCG-
ATGACTCAGCAD
 A C G T A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G A C G T
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----KGCCTAAGCG-
AGGATGACTCAGCAC
 A C G T A C G T A C G T A C G T A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G A C G T
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KGCCTAAGCG----
---CTAATCCTCTT
 A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:KGCCTAAGCG-
---TTAATCCG
 A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KGCCTAAGCG--
--GCTAAACGGT
 A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G A C G T A C G T
A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KGCCTAAGCG
GATGACTCAGCA
 A C G T A C G T A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G
T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:KGCCTAAGCG----
---GTCAGCANNTN
 A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:KGCCTAAGCG---
-GCCTCAGGGCAT
 A C G T T A C G G A T C A G T C A C G T G T C A T C G A T C A G A G T C A T C G A C G T A C G T A C G T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T