Information for 3-GCCAGAGCTGAGC (Motif 2)

A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
Reverse Opposite:
A C T G G T A C A C G T A G T C T C G A A C T G A T G C A C G T A G T C A C G T A C T G A C T G A G T C
p-value:1e-15
log p-value:-3.569e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.4 +/- 25.3bp
Average Position of motif in Background43.9 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGAGCTGAGC
ATGCCAGACN-----
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCAGAGCTGAGC
GAGSCCGAGC-----
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGCTGAGC
TGCCAA--------
 A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAGCTGAGC
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCCAGAGCTGAGC
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCCAGAGCTGAGC
--AACAGCTG---
 A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCCAGAGCTGAGC
--CGGAGC-----
 A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAGCTGAGC
GRTGMTRGAGCC----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCCAGAGCTGAGC
--CGCAGCTGCG-
 A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCAGAGCTGAGC
---HCAGCTGDTN
 A C T G A G T C A G T C C G T A A C T G C G T A A T C G A G T C A C G T A C T G G T C A A C T G A G T C
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T