Information for 2-ANTTTTATKAGCM (Motif 3)

C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
Reverse Opposite:
C A G T T C A G A T G C A G C T G T A C C T G A A C G T C G T A C G T A C G T A C T G A G A T C G A C T
p-value:1e-32
log p-value:-7.412e+01
Information Content per bp:1.656
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif9.99%
Number of Background Sequences with motif882.7
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets53.8 +/- 25.0bp
Average Position of motif in Background49.6 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:ANTTTTATKAGCM
--TTTTATTRGN-
 C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:ANTTTTATKAGCM
DGWTTTATGRCN-
 C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.88
Offset:2
Orientation:forward strand
Alignment:ANTTTTATKAGCM
--TTTTATKRGG-
 C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:ANTTTTATKAGCM
-NTTTTATTGG--
 C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:5
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:ANTTTTATKAGCM
--TTTAATTGCN-
 C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:ANTTTTATKAGCM
-NTTTTATTACN-
 C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:ANTTTTATKAGCM
--TTTTATTGC--
 C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-ANTTTTATKAGCM--
NAATTTTACGAGNTNN
 A C G T C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:ANTTTTATKAGCM
-TTTTTATTGG--
 C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:ANTTTTATKAGCM
-NTTTTATGAC--
 C T G A C T A G G A C T A C G T A C G T C G A T C G T A A G C T C A T G C T G A A T C G A G T C G T C A
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T