Information for 16-AAAAGCAGCCCCA (Motif 17)

C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G A C T G A C T G A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.4 +/- 22.0bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAAGCAGCCCCA--
AGCAACAGCCGCACC
 C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAAGCAGCCCCA
ADGGYAGYAGCATCT
 A C G T A C G T C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAAGCAGCCCCA
AGCAGCTGCTNN-
 C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAAAGCAGCCCCA
-----CAGCC---
 C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAAGCAGCCCCA
AGCAGCTGCT---
 C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAAAGCAGCCCCA--------
-GAAGTANCACGAATNMRAGT
 C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAAAGCAGCCCCA----
-ATCCCCGCCCCTAAAA
 C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAAAGCAGCCCCA
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAAAGCAGCCCCA-
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAAAGCAGCCCCA
AACAGCTG-----
 C G T A C T G A G T C A C G T A A C T G A G T C C G T A A C T G A G T C A G T C A T G C A G T C C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T