Information for 10-GGACAGCTCC (Motif 13)

C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C
Reverse Opposite:
C T A G A C T G G T C A C T A G A G T C A C G T A T C G C G A T A G T C G A T C
p-value:1e-12
log p-value:-2.971e+01
Information Content per bp:1.862
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif231.0
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets59.1 +/- 24.2bp
Average Position of motif in Background50.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GGACAGCTCC--
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.68
Offset:-10
Orientation:reverse strand
Alignment:----------GGACAGCTCC
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGACAGCTCC--
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGACAGCTCC--
-AACAGCTGCAG
 C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGACAGCTCC--
-GACAGCTGCAG
 C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGACAGCTCC
-CACAGN---
 C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGACAGCTCC-
NGNGACAGCTGCN
 A C G T A C G T C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GGACAGCTCC-
-----GCTCCG
 C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.66
Offset:-11
Orientation:forward strand
Alignment:-----------GGACAGCTCC
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGACAGCTCC--
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T C T A G C T A G G C T A A T G C C G T A A C T G G A T C C A G T A G T C A G T C A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T