| p-value: | 1e-12 |
| log p-value: | -2.991e+01 |
| Information Content per bp: | 1.916 |
| Number of Target Sequences with motif | 16.0 |
| Percentage of Target Sequences with motif | 2.00% |
| Number of Background Sequences with motif | 66.4 |
| Percentage of Background Sequences with motif | 0.14% |
| Average Position of motif in Targets | 59.7 +/- 26.0bp |
| Average Position of motif in Background | 50.6 +/- 31.1bp |
| Strand Bias (log2 ratio + to - strand density) | 1.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 1 |
| Score: | 0.89
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCTGCTGTGA
CCCCCTGCTGTG- |
|
|
|
PB0205.1_Zic1_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.89
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCTGCTGTGA--
TNTCCTGCTGTGNNG |
|
|
|
PB0207.1_Zic3_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.89
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCTGCTGTGA--
NNTCCTGCTGTGNNN |
|
|
|
PB0206.1_Zic2_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.87
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCTGCTGTGA--
TCNCCTGCTGNGNNN |
|
|
|
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
| Match Rank: | 5 |
| Score: | 0.86
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CCTGCTGTGA
GGCCYCCTGCTGDGH |
|
|
|
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
| Match Rank: | 6 |
| Score: | 0.85
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CCTGCTGTGA
CCTGCTGAGH |
|
|
|
ZIC1/MA0696.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.72
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CCTGCTGTGA
GACCCCCCGCTGTG- |
|
|
|
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer
| Match Rank: | 8 |
| Score: | 0.70
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CCTGCTGTGA
CCAGCTGTTN |
|
|
|
POL009.1_DCE_S_II/Jaspar
| Match Rank: | 9 |
| Score: | 0.69
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | CCTGCTGTGA
---GCTGTG- |
|
|
|
ZIC3/MA0697.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.69
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CCTGCTGTGA
GACCCCCCGCTGCGC |
|
|
|
