Information for 5-ACAACACBTT (Motif 12)

C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T
Reverse Opposite:
G T C A C G T A T G C A C T A G C A G T A C T G A C G T A C G T T A C G G C A T
p-value:1e-2
log p-value:-6.866e+00
Information Content per bp:1.615
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif7.88%
Number of Background Sequences with motif1653.2
Percentage of Background Sequences with motif3.53%
Average Position of motif in Targets44.1 +/- 27.8bp
Average Position of motif in Background50.2 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAX/MA0058.3/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACAACACBTT--
--ACCACGTGCT
 C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

CLOCK/MA0819.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACAACACBTT--
--AACACGTGTT
 C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T A C G T A C G T
A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACAACACBTT
--ACCACGTG
 C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T
A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACAACACBTT--
--ACCACCTGTT
 C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T A C G T A C G T
A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:ACAACACBTT
----CACGTG
 C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

MNT/MA0825.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACAACACBTT--
--ACCACGTGCC
 C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T A C G T A C G T
A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

PB0043.1_Max_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACAACACBTT----
CCNNANCACGTGGTCN
 A C G T A C G T C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACAACACBTT----
--ACCACGTGGTNN
 C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ACAACACBTT-
---ACACGTGC
 C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACAACACBTT--
--ACCACTTGAA
 C G T A A T G C G T C A T G C A T G A C G T C A A G T C A C G T G C A T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A