Information for 6-CCAGAGGGSGCTGCAG (Motif 7)

A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
Reverse Opposite:
A G T C C A G T C T A G A G T C C G T A C T A G G T A C A T C G G T A C A G T C G T A C A G C T A T G C A C G T C T A G A T C G
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.816
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 25.7bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCAGAGGGSGCTGCAG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CCAGAGGGSGCTGCAG
TGGCCACCAGGGGGCGCTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CCAGAGGGSGCTGCAG
--------NGCTN---
 A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CCAGAGGGSGCTGCAG
TGGCCACCAGGTGGCACTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCAGAGGGSGCTGCAG
--RGKGGGCGGAGC--
 A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCAGAGGGSGCTGCAG----
---AATCGCACTGCATTCCG
 A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CCAGAGGGSGCTGCAG
---------GCTGTG-
 A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCAGAGGGSGCTGCAG
ANTGCGGGGGCGGN--
 A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCAGAGGGSGCTGCAG
--GGCGGGGGCGGGGG
 A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CCAGAGGGSGCTGCAG
-NNVDGGGYGGGGCYN
 A T G C A G T C G T C A T A C G C T G A A C T G C T A G A C T G A T G C A C T G A G T C A C G T A C T G A G T C G C T A A C T G
A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A