Information for 10-AAAAAAAATTTCA (Motif 6)

C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A
Reverse Opposite:
C G A T A T C G C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A G C T C G A T A C G T
p-value:1e-12
log p-value:-2.929e+01
Information Content per bp:1.896
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.1 +/- 31.2bp
Average Position of motif in Background36.5 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0116.1_Elf3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAATTTCA
GTTCAAAAAAAAAATTC-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAATTTCA
GTTAAAAAAAAAAATTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAAAAAAATTTCA---
-GAAAAAATTGCAAGG
 C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A A C G T A C G T A C G T
A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AAAAAAAATTTCA
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAATTTCA
AGCCGAAAAAAAAAT---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAAAATTTCA
AAACAAACATTC--
 A C G T C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAATTTCA
AACAAACAACAAGAG--
 A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAAAAAAATTTCA-----
---AACAATTTCAGTGTT
 C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAAAAAATTTCA--
ATAAACAATTAAACA
 C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAATTTCA
CTACCAATAAAATTCT--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A A C G T A G C T A C G T A T G C C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T