Information for 9-ATGAYCATSAKAR (Motif 5)

C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
Reverse Opposite:
A G C T A C G T G T A C A G C T A T G C C G T A A C G T A C T G C T A G A C G T A G T C C G T A A G C T
p-value:1e-13
log p-value:-3.094e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 26.8bp
Average Position of motif in Background23.2 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATGAYCATSAKAR
NATGACCTTGA---
 A C G T C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATGAYCATSAKAR
ATGACCTTGAA--
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATGAYCATSAKAR
ATGACCTTGA---
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATGAYCATSAKAR
TAGTGATCATCATTA
 A C G T A C G T C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATGAYCATSAKAR
CATGAC--------
 A C G T C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGAYCATSAKAR
NTGACCTTGA---
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGAYCATSAKAR
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATGAYCATSAKAR
-TGACCTTGAT--
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGAYCATSAKAR
-TGACCTTGAV--
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATGAYCATSAKAR--
ATTTGCATAACAAAG
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A C T G C G T A C T G A A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G