Information for 5-GCWCTYTGCWGAG (Motif 6)

C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G
Reverse Opposite:
A G T C C G A T A T G C C G T A A C T G A G T C C G T A T C G A C T G A C T A G C G T A A C T G A G T C
p-value:1e-14
log p-value:-3.411e+01
Information Content per bp:1.796
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 26.1bp
Average Position of motif in Background40.0 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCWCTYTGCWGAG
-CCCCCTGCTGTG
 C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCWCTYTGCWGAG-
GGCCYCCTGCTGDGH
 A C G T C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCWCTYTGCWGAG----
--AAANTGCTGACTNAG
 C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCWCTYTGCWGAG
--AATTTGCTGAC
 C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G
A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCWCTYTGCWGAG----
-----HTGCTGAGTCAT
 C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GCWCTYTGCWGAG---
------TGCTGACTCA
 C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCWCTYTGCWGAG-----
NAAAANTGCTGACTCAGC
 C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCWCTYTGCWGAG-------
-----NTGCTGAGTCATCCN
 C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCWCTYTGCWGAG----
--AWWNTGCTGAGTCAT
 C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A G C A T G C A T T A C G G T A C G A C T A C T G C G T A A T C G A C G T G T A C C G T A A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCWCTYTGCWGAG-
----CCTGCTGAGH
 C T A G A G T C G C A T A G T C A G C T A G C T A C G T A C T G A G T C C G A T A T C G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A