Information for 2-CWHATTTGCATACYMN (Motif 2)

A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
Reverse Opposite:
C A T G A C T G C T A G C T A G G A C T G C T A G A C T A T C G G A T C C G T A T C G A G C T A G A C T C A G T G C T A A T C G
p-value:1e-44
log p-value:-1.030e+02
Information Content per bp:1.542
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.80%
Number of Background Sequences with motif187.7
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets53.3 +/- 22.8bp
Average Position of motif in Background49.6 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0144.1_Pou2f2/Jaspar

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-CWHATTTGCATACYMN
TNTAATTTGCATANNN-
 A C G T A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:2
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-CWHATTTGCATACYMN
TNTAATTTGCATACNA-
 A C G T A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-CWHATTTGCATACYMN
TNTAATTTGCATACNA-
 A C G T A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.93
Offset:3
Orientation:forward strand
Alignment:CWHATTTGCATACYMN
---ATTTGCATAA---
 A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CWHATTTGCATACYMN
TTCATTTGCATAT---
 A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:CWHATTTGCATACYMN
---ATTTGCATA----
 A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:CWHATTTGCATACYMN
---ATTTGCATA----
 A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:CWHATTTGCATACYMN
CTCATTTGCATW----
 A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:CWHATTTGCATACYMN
BTVATTWGCATA----
 A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:CWHATTTGCATACYMN
--AATTTGCATANT--
 A T G C C G A T G T C A C G T A C G A T A G C T C G A T C T A G A T G C C T G A C G A T C T G A G A T C G A T C T G A C G T A C
A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T