Information for 11-ATGCACTGTGGGT (Motif 17)

C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A G T C G T C A A C G T
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.941
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 25.4bp
Average Position of motif in Background62.1 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--ATGCACTGTGGGT-
CAATGCATTGTGGGTA
 A C G T A C G T C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATGCACTGTGGGT-
---GTCTGTGGTTT
 C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ATGCACTGTGGGT--
-----CTGTGGTTTN
 C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ATGCACTGTGGGT-
----GCTGTGGTTT
 C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATGCACTGTGGGT--
---NNHTGTGGTTWN
 C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATGCACTGTGGGT-
----NNTGTGGTTT
 C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATGCACTGTGGGT
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATGCACTGTGGGT
ATGCCCTGAGGC-
 C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATGCACTGTGGGT
----GCTGTG---
 C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATGCACTGTGGGT---
-RGSMTBCTGGGAAAT
 C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T