Information for 5-GGAGSTKGCTSTC (Motif 8)

A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C
Reverse Opposite:
A C T G C G T A T A G C C T G A A C T G A G T C G T C A C G T A A T C G G T A C A G C T A G T C A G T C
p-value:1e-13
log p-value:-3.192e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 20.8bp
Average Position of motif in Background52.0 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGSTKGCTSTC
CGGAGC--------
 A C G T A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGAGSTKGCTSTC
ACAGGATGTGGT----
 A C G T A C G T A C G T A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGAGSTKGCTSTC--
-------GCTGTCAA
 A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGAGSTKGCTSTC
GGGAATTTCC----
 A C G T A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GGAGSTKGCTSTC
TTAAGAGGAAGTTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GGAGSTKGCTSTC--
-------CCTGTCAA
 A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGAGSTKGCTSTC
GGGAATTTCC----
 A C G T A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GGAGSTKGCTSTC
ACAGGAAGTG------
 A C G T A C G T A C G T A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GGAGSTKGCTSTC
GGGGATTTCC----
 A C G T A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GGAGSTKGCTSTC-----
--AACTAGCTGTCAATAC
 A C T G A C T G C T G A A C T G A T G C A C G T A C G T T A C G A G T C A G C T A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C