Information for 19-WGCTAGCTAG (Motif 47)

C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A T C G G T A C A C G T C G T A C T A G A T G C C G T A
p-value:1e-6
log p-value:-1.456e+01
Information Content per bp:1.832
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif101.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets52.2 +/- 21.0bp
Average Position of motif in Background53.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--WGCTAGCTAG-----
GANGTTAACTAGTTTNN
 A C G T A C G T C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---WGCTAGCTAG----
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WGCTAGCTAG-
-GTTAACTAGN
 C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--WGCTAGCTAG-----
AAAGCTAATTAGCGAAA
 A C G T A C G T C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

PH0032.1_Evx2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---WGCTAGCTAG----
CACCGCTAATTAGCGGT
 A C G T A C G T A C G T C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0034.1_Gbx2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--WGCTAGCTAG-----
AGCGCTAATTAGCGATT
 A C G T A C G T C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---WGCTAGCTAG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:WGCTAGCTAG
--TTAATTAG
 C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G
A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

PH0131.1_Pax4/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---WGCTAGCTAG----
NNGNGCTAATTAGNTNA
 A C G T A C G T A C G T C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G A C G T A C G T A C G T A C G T
C A T G G A C T A T C G T C A G C T A G A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G C A T A G C T A T G C C G T A

PH0154.1_Prrx1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---WGCTAGCTAG----
ANNAGTTAATTAGTTAN
 A C G T A C G T A C G T C G A T A T C G A G T C A C G T C G T A C A T G A T G C C G A T C G T A A C T G A C G T A C G T A C G T A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C