Information for 24-GCCTCAGGCRTTC (Motif 43)

C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
Reverse Opposite:
C T A G C T G A C T G A A G C T A C T G G T A C A G T C C G A T A C T G C T G A C T A G A C T G A G T C
p-value:1e-7
log p-value:-1.773e+01
Information Content per bp:1.729
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif42.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.7 +/- 20.1bp
Average Position of motif in Background49.8 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GCCTCAGGCRTTC
AGCCTCAGGCA---
 A C G T C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GCCTCAGGCRTTC
AGCCTCAGGCA---
 A C G T C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GCCTCAGGCRTTC
CGCCTCAGGCA---
 A C G T C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGGCRTTC
NTNGCCTCAGGCNNN-
 A C G T A C G T A C G T C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---GCCTCAGGCRTTC
ATTGCCTCAGGCAAT-
 A C G T A C G T A C G T C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGGCRTTC
NTCGCCTCAGGCAAT-
 A C G T A C G T A C G T C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGGCRTTC
WTGSCCTSAGGS----
 A C G T A C G T A C G T C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGGCRTTC
NTCCCCTCAGGGANT-
 A C G T A C G T A C G T C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCCTCAGGCRTTC
GCCTCAGGGCAT-
 C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCTCAGGCRTTC
TGCCCCCGGGCA---
 A C G T A C G T C T A G A G T C A G T C A G C T G T A C C G T A C T A G A C T G A G T C T C G A A G C T A G C T G A T C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T