Information for 21-ATGGCTATGTAGG (Motif 39)

T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
Reverse Opposite:
A T G C G A T C A C G T C G T A A G T C C G T A G C A T C G T A A C T G A T G C G T A C C T G A A C G T
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.772
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 22.9bp
Average Position of motif in Background34.6 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ATGGCTATGTAGG
----CTTTGT---
 T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATGGCTATGTAGG-
--GNCTATAAAAGG
 T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G A C G T
A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGGCTATGTAGG
ATGACCTTGAA--
 T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCTATGTAGG
AYATGYATATGCATR
 A C G T A C G T T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGGCTATGTAGG
AGGVNCCTTTGT---
 A C G T A C G T T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATGGCTATGTAGG
CTCATGAATATTCAT-
 A C G T A C G T A C G T T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ATGGCTATGTAGG
---CCWTTGTYYB
 T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATGGCTATGTAGG
-TGACCTTGAN--
 T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATGGCTATGTAGG
-TGACCTTGAV--
 T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ATGGCTATGTAGG
---CCTTTGATGT
 T G C A A G C T A C T G T A C G G T A C A C G T C G T A A C G T A C T G C G A T C G T A C A T G A T C G
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T