Information for 23-GGAYTTTGAAAACMAR (Motif 37)

C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G
Reverse Opposite:
A G T C A C G T C A T G A T C G A G C T C G A T A C G T G A C T G T A C C T G A C G T A C T G A C T G A A G C T A T G C A G T C
p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.697
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif96.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets50.0 +/- 25.2bp
Average Position of motif in Background45.3 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGAYTTTGAAAACMAR
NNATTGGACTTTNGNN-----
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGAYTTTGAAAACMAR
----TTTGAAACCG--
 C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGAYTTTGAAAACMAR
ATTGGACTTTGACCCC---
 A C G T A C G T A C G T C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGAYTTTGAAAACMAR----
---GTTAAAAAAAAAAATTA
 C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GGAYTTTGAAAACMAR--
---ATTTGCATACAATGG
 C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GGAYTTTGAAAACMAR-
---TACTGGAAAAAAAA
 C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G A C G T
A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

Foxk1/MA0852.1/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GGAYTTTGAAAACMAR---
--AAAATGTAAACAAACAG
 C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GGAYTTTGAAAACMAR---
--AAAATGTAAACAAACAG
 C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GGAYTTTGAAAACMAR---
--TAAATGTAAACAAAGGT
 C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------GGAYTTTGAAAACMAR
TGAACCGGATTAATGAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G C T G A G A C T A G C T G C A T A G C T C A T G C T G A G T C A C G T A C T G A T A G C G T A C C G T A C T A G
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T A C G T A C G T A C G T A C G T