Information for 21-TGGATGAAAWCCARAC (Motif 35)

A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C
Reverse Opposite:
A T C G A C G T A G C T A C G T A C T G A C T G G C T A A G C T C G A T A C G T A G T C G C T A C A G T A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.741
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 27.7bp
Average Position of motif in Background23.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGATGAAAWCCARAC
TGGCAGNCTGCCAG--
 A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGATGAAAWCCARAC
TTGGCANNNTGCCAAG-
 A C G T A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGATGAAAWCCARAC
-TGACANARRCCAGRC
 A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C
A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGATGAAAWCCARAC
TGGCACCATGCCAA--
 A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TGGATGAAAWCCARAC-
-------ATGCCAGACN
 A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGATGAAAWCCARAC
----TCCAATCCACA-
 A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C
A C G T A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TGGATGAAAWCCARAC-
-------AAACCACANN
 A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TGGATGAAAWCCARAC--
-------AAACCACAGAN
 A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGATGAAAWCCARAC
GTGGAT-----------
 A C G T A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGGATGAAAWCCARAC------
-----CAAATCCAGACATCACA
 A C G T A C T G A C T G G T C A C A G T T C A G C G T A C G T A C T G A C G A T T G A C A G T C C G T A C T G A T G C A T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A