Information for 18-AARAAAMRCAASACAA (Motif 25)

C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A
Reverse Opposite:
C G A T A C G T A T C G A C G T A T C G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C G T A C G T
p-value:1e-11
log p-value:-2.591e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 29.8bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AARAAAMRCAASACAA
GAAAAAATTGCAAGG---
 A C G T A C G T C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AARAAAMRCAASACAA-
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AARAAAMRCAASACAA----
----ATATCAAAACAAAACA
 C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AARAAAMRCAASACAA
-CAAACAACAACACCT
 C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AARAAAMRCAASACAA
TACTGGAAAAAAAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AARAAAMRCAASACAA
-AAAAAATCAATAAT-
 C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A
A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AARAAAMRCAASACAA----
---AACACCAAAACAAAGGA
 C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AARAAAMRCAASACAA
GTTAAAAAAAAAAATTA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AARAAAMRCAASACAA--
----AAGATAAGATAACA
 C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AARAAAMRCAASACAA
-AGAAACGAAAGT---
 C G T A C G T A C T G A G T C A C G T A C G T A G T C A C T A G A G T C C G T A C G T A A T G C C G T A A T G C C G T A C G T A
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T