Information for 10-ACTGGATCTTTAA (Motif 20)

C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A
Reverse Opposite:
A C G T A G C T C T G A G T C A C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C T G A C G T
p-value:1e-11
log p-value:-2.591e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 22.3bp
Average Position of motif in Background49.8 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACTGGATCTTTAA--
--TTAATGTTTAACC
 C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

POU4F1/MA0790.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACTGGATCTTTAA--
-ATGAATAATTAATG
 C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A A C G T A C G T
A C G T T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTGGATCTTTAA
ANCAGGATGT----
 A C G T C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACTGGATCTTTAA----
-ATGCATAATTAATGAG
 C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

POU4F2/MA0683.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACTGGATCTTTAA----
-ATGCATAATTAATGAG
 C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACTGGATCTTTAA
ACCCGGATGTA---
 A C G T C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------ACTGGATCTTTAA
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ACTGGATCTTTAA--
---AGGTCTCTAACC
 C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ACTGGATCTTTAA
--NGGATTAN---
 C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--ACTGGATCTTTAA-
NNATTGGACTTTNGNN
 A C G T A C G T C G T A A G T C A C G T A C T G C T A G C G T A A C G T A G T C A C G T A C G T A G C T C T G A C G T A A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C