Information for 2-TTYAAACKGC (Motif 2)

C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C
Reverse Opposite:
T C A G T G A C T G C A C A T G A C G T A C G T G A C T C T G A T G C A G T C A
p-value:1e-23
log p-value:-5.314e+01
Information Content per bp:1.646
Number of Target Sequences with motif138.0
Percentage of Target Sequences with motif20.78%
Number of Background Sequences with motif3719.9
Percentage of Background Sequences with motif8.25%
Average Position of motif in Targets49.6 +/- 24.1bp
Average Position of motif in Background50.1 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TTYAAACKGC
NATTCAAAT---
 A C G T A C G T C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TTYAAACKGC
CGGTTTCAAA----
 A C G T A C G T A C G T A C G T C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TTYAAACKGC--
--NHAACBGYYV
 C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTYAAACKGC--
--CCAACTGCCA
 C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

MYBL2/MA0777.1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTYAAACKGC-
AACCGTTAAACGGTC
 A C G T A C G T A C G T A C G T C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTYAAACKGC
TATCATTAGAACGCT
 A C G T A C G T A C G T A C G T A C G T C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTYAAACKGC--
----AACCGANA
 C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTYAAACKGC-
---YAACBGCC
 C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTYAAACKGC
CCTTTGATGT--
 A C G T A C G T C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTYAAACKGC--
--CCAACTGCCA
 C A G T A C G T G A C T C T G A C G T A G T C A G T A C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A