Information for 13-GRCAGBTTAGABTTCA (Motif 18)

A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
Reverse Opposite:
A C G T T A C G T C G A G T C A T G C A A C G T A T G C A G C T T C G A C G T A T A C G G T A C C G A T A T C G G A C T A T G C
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.663
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif50.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets56.0 +/- 15.4bp
Average Position of motif in Background51.2 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GRCAGBTTAGABTTCA
--GAGGTCAAAGGTCA
 A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GRCAGBTTAGABTTCA
---TGCTGTGATTT--
 A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GRCAGBTTAGABTTCA
-AGGGGTCAGAGGTCA
 A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GRCAGBTTAGABTTCA
-----CNGTGATTTN-
 A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GRCAGBTTAGABTTCA
TGGCAGTTGN-------
 A C G T A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GRCAGBTTAGABTTCA
GAGTTCATTGAGTTCA
 A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GRCAGBTTAGABTTCA
----GCAGTGATTT--
 A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GRCAGBTTAGABTTCA
CANAGNNCAAAGTCCA
 A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GRCAGBTTAGABTTCA
--GAGGTCAAAGGTCA
 A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A
A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GRCAGBTTAGABTTCA--
--GGGGTCAAAGTCCAAT
 A T C G C T G A A T G C C G T A A C T G A T C G C G A T A G C T C T G A T A C G C G T A A C G T A C G T A G C T A T G C G T C A A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T