Information for 12-TSTCTTAAAAAAATGC (Motif 17)

A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A T C G C T G A
p-value:1e-12
log p-value:-2.778e+01
Information Content per bp:1.828
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 20.5bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TSTCTTAAAAAAATGC----
-----GAAAAAATTGCAAGG
 A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TSTCTTAAAAAAATGC
-TACTGGAAAAAAAA-
 A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TSTCTTAAAAAAATGC
-GTCGTAAAAT-----
 A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TSTCTTAAAAAAATGC
-GTCGTAAAAA-----
 A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TSTCTTAAAAAAATGC
GCTCGTAAAAA-----
 A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TSTCTTAAAAAAATGC
TAAGGTCGTAAAATCCT--
 A C G T A C G T A C G T A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TSTCTTAAAAAAATGC
AAAGCTCGTAAAATTT---
 A C G T A C G T A C G T A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TSTCTTAAAAAAATGC
CCGTATTATAAACAA--
 A C G T A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TSTCTTAAAAAAATGC
AGTCGTAAAAA-----
 A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TSTCTTAAAAAAATGC
GGTCGTAAAAT-----
 A G C T A T G C C G A T A G T C C G A T C G A T G T C A C T G A C G T A C G T A C G T A G T C A T G C A A C G T A C T G A G T C
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T A C G T A C G T A C G T