Information for 11-AAAGGTAGTTCAGTTA (Motif 16)

G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A
Reverse Opposite:
C G A T C G T A C T G A A T G C C G A T A C T G C G T A C G T A G T A C C G A T C T G A A G T C A T G C C G A T A C G T A C G T
p-value:1e-12
log p-value:-2.778e+01
Information Content per bp:1.901
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 10.9bp
Average Position of motif in Background42.5 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AAAGGTAGTTCAGTTA-------
------NTTTTAGTTAACNNAGN
 G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAAGGTAGTTCAGTTA----
-----TAATTCAATGAAGTG
 G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTAGTTCAGTTA
TATAAGTAGGTCAA---
 A C G T G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AAAGGTAGTTCAGTTA
-----TAATTAAATTA
 G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AAAGGTAGTTCAGTTA
-----TAATTAAATTA
 G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AAAGGTAGTTCAGTTA
-----TAATTAAATTA
 G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AAAGGTAGTTCAGTTA-------
------NNNTTAGTTAACTNANN
 G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AAAGGTAGTTCAGTTA-
-------BRRCVGTTDN
 G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTAGTTCAGTTA
AACAGGAAGT-------
 A C G T G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:AAAGGTAGTTCAGTTA
-------TGTCGGTT-
 G T C A G T C A C G T A A T C G C T A G A G C T C G T A A C T G A C G T A C G T A G T C C G T A A T C G A G C T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T