Information for 7-GGCTTTCAAA (Motif 8)

A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A
Reverse Opposite:
C G A T G A C T A C G T C T A G C T G A C G T A C G T A A C T G A G T C T A G C
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.824
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.62%
Number of Background Sequences with motif352.0
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets48.1 +/- 23.5bp
Average Position of motif in Background49.7 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGCTTTCAAA
CGGTTTCAAA
 A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGCTTTCAAA-
--NATTCAAAT
 A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCTTTCAAA
TGGTTTCAGT
 A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCTTTCAAA
-GCTGTCAA-
 A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCTTTCAAA--
GNCTATAAAAGG
 A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A A C G T A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGCTTTCAAA--
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCTTTCAAA-
-CCTTTGATGT
 A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGCTTTCAAA---
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCTTTCAAA
-CCTGTCAA-
 A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGCTTTCAAA--
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A T C G T C A G T G A C C G A T A C G T A G C T G A T C G T C A C T G A G C T A A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T