Information for 11-CTATCTCAHAAAA (Motif 18)

A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A A C G T C T A G C G T A C T A G C G T A C G A T C G T A A T C G
p-value:1e-7
log p-value:-1.707e+01
Information Content per bp:1.846
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif28.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.4 +/- 27.4bp
Average Position of motif in Background50.4 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTATCTCAHAAAA---
AAAGCTCGTAAAATTT
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTATCTCAHAAAA-
---GCTCGTAAAAA
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTATCTCAHAAAA---
AAACCTCGTAAAATTT
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTATCTCAHAAAA
---CCYMATAAAA
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTATCTCAHAAAA
---NCYAATAAAA
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTATCTCAHAAAA-
----CCAATAAAAA
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTATCTCAHAAAA----
-CTACCAATAAAATTCT
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTATCTCAHAAAA-
----GTCGTAAAAT
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTATCTCAHAAAA-
----CCAATAAAAA
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTATCTCAHAAAA-
----CCAATAAAAC
 A T G C A C G T C G T A C G A T A G T C A C G T A G T C G T C A G A C T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C