Information for 4-TTGAAAAAGCAGC (Motif 7)

A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C
Reverse Opposite:
A C T G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A T G C G C T A C G T A
p-value:1e-9
log p-value:-2.277e+01
Information Content per bp:1.942
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 18.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT5/MA0606.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAAAAGCAGC
NATGGAAAAN-----
 A C G T A C G T A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTGAAAAAGCAGC
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGAAAAAGCAGC
TGGAAAA------
 A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAAAAGCAGC
AATGGAAAAT-----
 A C G T A C G T A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTGAAAAAGCAGC
CGGTTTCAAA-------
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TTGAAAAAGCAGC
TACTGGAAAAAAAA--
 A C G T A C G T A C G T A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAAAAGCAGC
NATTCAAAT------
 A C G T A C G T A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTGAAAAAGCAGC--
-GGAGAAAGGTGCGA
 A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TTGAAAAAGCAGC
AAATAAGAAAAAAC---
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTGAAAAAGCAGC--
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A T C G A G T C A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T