Information for 1-CAATATGGCG (Motif 5)

T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G
Reverse Opposite:
T A G C A C T G A G T C A G T C C T G A C G A T T G C A G A C T A G C T A T C G
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.743
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif5.39%
Number of Background Sequences with motif278.3
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets46.4 +/- 25.5bp
Average Position of motif in Background53.8 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CAATATGGCG--
CAAGATGGCGGC
 T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CAATATGGCG--
CAAGATGGCGGC
 T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CAATATGGCG---
--TAATGGCGGNC
 T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAATATGGCG-------
NAGANTGGCGGGGNGNA
 T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Neurog1/MA0623.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAATATGGCG
ACCATATGGT-
 A C G T T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAATATGGCG--
---NTTGGCANN
 T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAATATGGCG
----TTGGCA
 T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAATATGGCG-
---GATGACGT
 T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G A C G T
A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAATATGGCG-------
NNNNTTGGCGCCGANNN
 T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F2/MA0864.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAATATGGCG-------
-AAAATGGCGCCATTTT
 T A G C C T G A C T G A A C G T C G T A A G C T A C T G C T A G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T