Information for 3-YGCTGGGAWTTGTAGT (Motif 3)

A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G T A A G T C C G T A C T G A C G T A A C G T A T G C A G T C A G T C C G T A A C T G T A G C C T A G
p-value:1e-13
log p-value:-3.040e+01
Information Content per bp:1.845
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif43.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets47.2 +/- 25.5bp
Average Position of motif in Background53.8 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---YGCTGGGAWTTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---YGCTGGGAWTTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.83
Offset:4
Orientation:reverse strand
Alignment:YGCTGGGAWTTGTAGT
----GGGAATTGTAGT
 A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T
A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:YGCTGGGAWTTGTAGT----
----GNNATTTGTCGTAANN
 A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:YGCTGGGAWTTGTAGT---
-------NNHTGTGGTTWN
 A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----YGCTGGGAWTTGTAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:YGCTGGGAWTTGTAGT---
---------CTGTGGTTTN
 A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-YGCTGGGAWTTGTAGT
WDNCTGGGCA-------
 A C G T A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:YGCTGGGAWTTGTAGT
GYCTGGYYTNTGTCA-
 A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:YGCTGGGAWTTGTAGT
TGCTGTGATTT-----
 A G T C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G A T A G C T A C G T A C T G A C G T T C G A A C T G A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T