Information for 7-ATCTTACGCS (Motif 21)

C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C
Reverse Opposite:
A T C G A T C G G T A C A C T G A C G T C T G A C G T A A C T G G C T A G A C T
p-value:1e-7
log p-value:-1.641e+01
Information Content per bp:1.750
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif165.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets57.8 +/- 24.1bp
Average Position of motif in Background49.0 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATCTTACGCS------
AAGCATACGCCCAACTT
 A C G T C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ATCTTACGCS
----CACGCA
 C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTACGCS----
NNNATTTTACGACNNTN
 A C G T A C G T A C G T C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATCTTACGCS-
NTTTTACGACT
 C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATCTTACGCS-
NTTTTACGACC
 C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATCTTACGCS--
--ATCACCCCAT
 C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C A C G T A C G T
A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

Gmeb1/MA0615.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTACGCS-----
NNNTNGTACGTAANNNN
 A C G T A C G T C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTACGCS-----
NNNTNGTACGTAANNNN
 A C G T A C G T C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCTTACGCS-
-TBGCACGCAA
 C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTACGCS----
ANNATTTTACGACNTNA
 A C G T A C G T A C G T C T G A C G A T G T A C A C G T A G C T C G T A G T A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A