Information for 6-CCGCCTGAGGGGG (Motif 15)

A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G
Reverse Opposite:
A G T C A G T C A T G C A G T C A G T C A C G T A G T C C G T A A C T G A C T G A G T C A T C G A C T G
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 13.1bp
Average Position of motif in Background10.1 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCGCCTGAGGGGG
-NGCCTGAGGCN-
 A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCGCCTGAGGGGG
-TGCCTGAGGCN-
 A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCGCCTGAGGGGG
-NGCCTNAGGCN-
 A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGAGGGGG-
ATTGCCTGAGGCAAT
 A C G T A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGAGGGGG-
ATTGCCTGAGGCGAA
 A C G T A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCTGAGGGGG
WTGSCCTSAGGS--
 A C G T A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCGCCTGAGGGGG
-TGCCCNGGGGCA
 A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGAGGGGG-
ATTCCCTGAGGGGAA
 A C G T A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCGCCTGAGGGGG-
--GCCTCAGGGCAT
 A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGCCTGAGGGGG
-TGCCCTNGGGCA
 A G T C A T G C A C T G A G T C A G T C A C G T A C T G G T C A A C T G A C T G A T C G A C T G A C T G
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A