Information for 9-GGMCGGCCCTCGGTGG (Motif 12)

A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G
Reverse Opposite:
A G T C A T G C C G T A G T A C A G T C A T C G G T C A A C T G C T A G C A T G A G T C A G T C A C T G A C G T A G T C G T A C
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.754
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.9 +/- 21.9bp
Average Position of motif in Background52.8 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGMCGGCCCTCGGTGG
--GGGGCCCAAGGGGG
 A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGMCGGCCCTCGGTGG---
----CCCCCCCGGGGGGGT
 A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGMCGGCCCTCGGTGG---
----CCCCCCCGGGGGGGT
 A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGMCGGCCCTCGGTGG
GGGCGGGACC-------
 A C G T A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GGMCGGCCCTCGGTGG--
----CACCCCCGGGGGGG
 A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

ZBTB7C/MA0695.1/Jaspar

Match Rank:6
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:GGMCGGCCCTCGGTGG----
--------NTCGGTGGTCGC
 A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GGMCGGCCCTCGGTGG
-----NNCCACGTGG-
 A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.47
Offset:0
Orientation:forward strand
Alignment:GGMCGGCCCTCGGTGG
AGACCCCCCACGAAGC
 A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---GGMCGGCCCTCGGTGG
NNNGGGGCGCCCCCNN---
 A C G T A C G T A C G T A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:10
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:GGMCGGCCCTCGGTGG--
--CCNNANCACGTGGTCN
 A C T G T A C G T G C A T A G C A C T G A C T G G T A C A G T C A G T C C A G T A T G C A C T G A C T G G C A T A T C G A C T G A C G T A C G T
A C G T A C G T G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A