Information for 8-GCTGGTAGSMAGTGGC (Motif 10)

A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G T A A T G C A G C T A C T G T A G C T A G C A G C T T G C A A G T C A T G C G T C A A C T G A T G C
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.719
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets60.6 +/- 18.3bp
Average Position of motif in Background50.3 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGTAGSMAGTGGC---
AACCGGTTNNAACCGGTTTN
 A C G T A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C A C G T A C G T A C G T
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCTGGTAGSMAGTGGC
------BTBRAGTGSN
 A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GCTGGTAGSMAGTGGC-
-------TTGAGTGSTT
 A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGTAGSMAGTGGC
NGCTN------------
 A C G T A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GCTGGTAGSMAGTGGC-
-------TTRAGTGSYK
 A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCTGGTAGSMAGTGGC
CATGCGGGTAC--------
 A C G T A C G T A C G T A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCTGGTAGSMAGTGGC
----ACAGGATGTGGT
 A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GCTGGTAGSMAGTGGC
------NTCAAGTGGN
 A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GCTGGTAGSMAGTGGC
-------TTAAGTGGT
 A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGTAGSMAGTGGC
NNTGTAGGTAGCANNT---
 A C G T A C G T A C G T A T C G A G T C A C G T A T C G A C T G A C G T T C G A A C T G A T C G T G A C C T G A A T C G C G A T A C T G C T A G G T A C
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T A C G T A C G T