p-value: | 1e-6 |
log p-value: | -1.409e+01 |
Information Content per bp: | 1.939 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.38% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 51.2 +/- 34.4bp |
Average Position of motif in Background | 26.8 +/- 10.7bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTGGTTACCACCT ---ATTAACACCT |
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RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTGGTTACCACCT CTGTGGTTTN----- |
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RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTGGTTACCACCT NNTGTGGTTT------ |
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RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTGGTTACCACCT GCTGTGGTTT------ |
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Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GTGGTTACCACCT- ----TTMACACCTT |
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RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTGGTTACCACCT NNHTGTGGTTWN----- |
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Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTGGTTACCACCT -----TGACACCT |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -8 |
Orientation: | forward strand |
Alignment: | --------GTGGTTACCACCT-- ACTGACCCTTGGTTACCACAAAG |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTGGTTACCACCT TACCCTAGTTACCGA-- |
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FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTGGTTACCACCT NYYTGTTTACHN--- |
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